CDS
| Accession Number | TCMCG056C31142 |
| gbkey | CDS |
| Protein Id | XP_031403646.1 |
| Location | complement(join(25000381..25000502,25000679..25000742,25000837..25000915,25001076..25001306,25001396..25001482,25001565..25001827,25001919..25002022,25002183..25002258,25002549..25002761,25002880..25002978,25003287..25003370,25003808..25003930,25004036..25004128,25004589..25004666,25004771..25004893,25004988..25005128,25005218..25005268,25005614..25005745,25005839..25005916,25006013..25006089,25006301..25006385)) |
| Gene | LOC116212999 |
| GeneID | 116212999 |
| Organism | Punica granatum |
Protein
| Length | 800aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA580467 |
| db_source | XM_031547786.1 |
| Definition | pre-rRNA-processing protein TSR1 homolog [Punica granatum] |
EGGNOG-MAPPER Annotation
| COG_category | S |
| Description | Pre-rRNA-processing protein TSR1 homolog |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14799
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005730 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043228 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043232 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGGACGGGTTCAAGTGAACAAGGTTCACAAGTCCCGCTTCTCGACGAAGTCCTCTCGGAACATTCACAAGACCTCTGTCAAAGATAAGAGTAGAATTGCCAAGTCGGGGGCCAATGTCAGCAAGGGTGCTCGTGCTGCGCGACTTCAGCACAATAGGATGGTGAGGGAGCAGAAACGGGCGGCACTTTTGAAAGAAAAGCGGGCTTCCACCGGATCAGCAAGTCCACCCCGTATGATTGTTCTTTTCGGTCTGTCAGCATTGGTAAACCTGGATTCAGTAGCTGAAGATCTTCTTAAATTGTTATCAGCTGAAGAAACTGCACCTGTTTCATCAACAGTCTCTTCTTCAGAGTATCGATTGCGGGCAACTGTGTTGAAAGCGCCACATGGTGATTTGGTTTCCTGCATGGAGATGGCCAAGGTGGCTGATCTCATAGCTTTCGTGGCATCAGCAAGTTCTTTGTGTGAAGACAGCGAATCCTACTATATTGATTCCTTTGGAAATCAATGTCTTTCAGTGTTTAGATCACTTGGTTTACCGAGTACAGTGGTCTTCATACGAGATCTTCCCTCAGAGATGAAAAGAAGAAATGAACTGAAGAAGATGTGTATATCTAGCCTCACTCCTGAATTCCCTGAAGACTGTAAATTCTATCCAGCCGATACAAAGGATGAATTGCACAAGTTCATGTGGCTCTTTAGGGAGCAAAGGCTTACAGTTCCTCATTGGCGAAATCAACACCCTTATCTTTTTGCTCATAAGGTGGATATGGCAAATGATGATCAGAATCCAGGAAAAAGTGCTCTTTTTCTCACTGGTTATGTCCGTGCCCGCAGTCTCTCAGTTAATCAGCTGGTTCATATTTCTGGTGTTGGAGATTTCCAGCTGGGCAAAATTGATGTTCTAAAAGACCCGTGTCCTTTAAATGCAAGGAAAGATCAAAACGCGATGGATTCAGATGAAGTTAATGGAGTGGAGGTTATCCAATCTCTGCAACCTGATCCTATGAAGCAGGAGGCGTTGCTCGTTGAGAATATTCCGGACCCTCTAGCTGGAGAGCAGACATGGCCAACTGAGGAAGAAATGGCTGAGGCAGAGAGATCCCAAAAACAGAAGAAATTAAGAAAGAGGATTCTCCCTCCAGGAACATCAGAATACCAGGCTGCTTGGATTGTCGATGATTCTGATGGGGGAGATTTGGCAAGTGATGATGGTGATGGTGATGATGAAGAGGATGATGATGGTATGGTGTTGGATGAAGGGGAAAATCGTCCTACTTCACAAGAGGGTGTAAAAGATTTTGAGGATGATGATCAAGCTTCTCTATACTTGCGGGACTCTGATGGAGAAACTGACACTGATTCCGTTATGATGGAAGCTGAGAACTTGACAAGAGAACAAATAAAGGAAGAAATACAAAAAATTAAAGAAGCACACGCCGAGGATGAGGAATTTCCTGATGAAGTCGATACACCTCTGGATGTTCCGGCTAGAAAGCGTTTCGCTCGATACAGGGGCCTCAAGTCCTTTAGAACCTCCTCCTGGGATCCTAAGGAATCATTGCCTGCAGACTATGCCCGAATATTTGCATTTGACAACTTCAAGAGGACGCAGAAGCATGTTTTTGCAAAAGCCTCGGATGTGGAGCAAGCTAATAACAAGGATGAGAGTGTGCCAGCTGGCACTTATGTTAGACTTGAGATTAAGGAAGTCCCTGCCAGTGTTGCTTCCAAATTATGTAACATTGTAAAGACATCGCCTGTGGTGGTATGTGGTCTCTTCCAGCACGAGTCCAAGATGTCCGTTCTACATTTCAGCATAAAGAAGCACGACACCTATGATGCTCCTATTAAAGCCAAAGAAGAACTAATATTTCATATGGGCTTTCGCCAATTTATGGCTCGACCTATATTTTCAACCGACAATATGAATTCCGACAAACACAAGATGGAGAGGTTTCTTCACGCAGGCCGCTTCTCTGTTGCTTCGATATACGCTCCGATATGTTTTCCTCCTCTCCCTCTGATAATCCTGAAAGAGGGAGATGGAGGCTCTCCACCATCTGTTGCAGCTGTCGGCTCCTTAAGAAGTGTCGACCCTGACAGAATAATTCTGAAGAAGATAATTTTGACTGGTTACCCTCAACGTGTGTCGAAGCTAAAAGCTACTGTCAGATACATGTTTCACAACCCCGAGGATGTAAGATGGTTCAAGCCGGTGGAAGTATGGACAAAGTGTGGATGTCGGGGTCGCATTAAGGAGCCTGTTGGCACACATGGGGCAATGAAGTGCGTGTTCAACGGGGGGCTACAGCAGCATGACACCGTGTGCATGAGCTTGTACAAGCGTGCTTATCCCAAGTGGCCTGAACATAGGTTCCCATTGCTCGATGCATCTTGA |
| Protein: MGRVQVNKVHKSRFSTKSSRNIHKTSVKDKSRIAKSGANVSKGARAARLQHNRMVREQKRAALLKEKRASTGSASPPRMIVLFGLSALVNLDSVAEDLLKLLSAEETAPVSSTVSSSEYRLRATVLKAPHGDLVSCMEMAKVADLIAFVASASSLCEDSESYYIDSFGNQCLSVFRSLGLPSTVVFIRDLPSEMKRRNELKKMCISSLTPEFPEDCKFYPADTKDELHKFMWLFREQRLTVPHWRNQHPYLFAHKVDMANDDQNPGKSALFLTGYVRARSLSVNQLVHISGVGDFQLGKIDVLKDPCPLNARKDQNAMDSDEVNGVEVIQSLQPDPMKQEALLVENIPDPLAGEQTWPTEEEMAEAERSQKQKKLRKRILPPGTSEYQAAWIVDDSDGGDLASDDGDGDDEEDDDGMVLDEGENRPTSQEGVKDFEDDDQASLYLRDSDGETDTDSVMMEAENLTREQIKEEIQKIKEAHAEDEEFPDEVDTPLDVPARKRFARYRGLKSFRTSSWDPKESLPADYARIFAFDNFKRTQKHVFAKASDVEQANNKDESVPAGTYVRLEIKEVPASVASKLCNIVKTSPVVVCGLFQHESKMSVLHFSIKKHDTYDAPIKAKEELIFHMGFRQFMARPIFSTDNMNSDKHKMERFLHAGRFSVASIYAPICFPPLPLIILKEGDGGSPPSVAAVGSLRSVDPDRIILKKIILTGYPQRVSKLKATVRYMFHNPEDVRWFKPVEVWTKCGCRGRIKEPVGTHGAMKCVFNGGLQQHDTVCMSLYKRAYPKWPEHRFPLLDAS |